Development figure for paper

[MathiasRenaud]

• x-axis: developmental time (expression ontology)
• y-axis: miRNA enrichment

Need to:

• [ ] Parse times from ZFIN WT Expression ontology terms.
• [ ] associate times with enriched miRNAs

Go from this:

Mathias@mr:~/Documents/499data/test/ranked-lists$ head WT_Expression-ranked.txt 
"name"  "Hyper_Adjp_BH" "miRNA"
"Segmentation:10-13 somites 14-16h; trigeminal placode" 2.1875882702e-22    "dre-miR-2193"
"Pharyngula:Prim-5 24-30h; statoacoustic (VIII) ganglion"   1.0305025487e-20    "dre-miR-2193"
"Hatching:Long-pec 48-60h; amacrine cell"   1.7810427398e-19    "dre-miR-733"
"Segmentation:26+ somites 22-24h; neural crest cell"    4.3512577302e-19    "dre-miR-733"
"Hatching:Long-pec 48-60h; corpuscles of Stannius"  4.01607419066667e-17    "dre-miR-733"
"Pharyngula:Prim-5 24-30h; vestibuloauditory system"    5.1522957255e-16    "dre-miR-2193"
"Segmentation:10-13 somites 14-16h; rhombomere 2"   5.1522957255e-16    "dre-miR-2193"
"Segmentation:14-19 somites 16-19h; rhombomere 6"   6.0837655365e-16    "dre-miR-733"
"Hatching:Pec-fin 60-72h; ceratohyal cartilage" 6.9464857584e-16    "dre-miR-733"

To something like this:

Time      miRNA
14-16h    dre-miR-2193
16-19h    dre-miR-733
22-24h    dre-miR-733
24-30h    dre-miR-2193
48-60h    dre-miR-733
60-72h    dre-miR-733

[MathiasRenaud]

Parsing terms:

• first, cut field 1 ("name")
• split this field on whitespace --> time is either field 2 or 3 now (depending on if "somites" is there)
• use regex (something like: "[d+]-[d+]h") to isolate the times.