Review formulations and Python environment issues

MatthewRalston / kmerdb

Python bioinformatics CLI for k-mer counts and de Bruijn graphs

https://matthewralston.github.io/kmerdb

Apache License 2.0

12 stars 1 forks source link

Review formulations and Python environment issues #139

Closed MatthewRalston closed 4 months ago

MatthewRalston commented 4 months ago

To begin, I need more understanding of the metrics and their historical use cases.

D2, D2z, etc. can be implemented in a variety of ways with performance in mind.

I'm continuing to experience issues with my Python environment. I'm happy with pipenv as a new build driver and venv manager. I'm having issues installing from source, should be fixed shortly.

MatthewRalston commented 4 months ago

Solved. Moved to system repo