MayurDivate / GUAVASourceCode

Source code repository for GUAVA (ATAC-seq data analysis tool).
GNU General Public License v3.0
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Fastq files are split up #13

Closed woeulii closed 5 years ago

woeulii commented 5 years ago

Hi, I am trying to use GUAVA and realized that my sequencing files have been split up in several fastq files. Is there a way to align the reads using GUAVA if there are several fastq files for one sample?

Thanks in advance!

MayurDivate commented 5 years ago

At the moment there is no way to feed multiple R1 and R2 fastq files. But you can concatenate those together using 'cat command'. Then use it for processing.

Cheers, Mayur