FSL's applywarp function doesn't take "nn" option for --interp flag

McIntosh-Lab / tvb-ukbb

TVB-UKBB Pipeline: TheVirtualBrain implementation of the UK Biobank pipeline

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FSL's applywarp function doesn't take "nn" option for --interp flag #11

Closed noahfl closed 4 years ago

noahfl commented 4 years ago

Not sure what goes here instead other than "trilinear"

logfile bb_structinit_sub002S0413.eXXXXXXX snippet:

+ /opt/fsl/bin/applywarp --rel --interp=trilinear --in=/liberatrix/mcintosh_lab/ukbb/UK_biobank_pipeline_v_1/templates/RM96/RM96_inMNI --ref=T1 -w T1_to_MNI_warp_coef_inv -o RM96_to_T1 --interp==nn                            
Unknown interpolation type =nn