FEAT processing of task-fMRI data incomplete

McIntosh-Lab / tvb-ukbb

TVB-UKBB Pipeline: TheVirtualBrain implementation of the UK Biobank pipeline

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Closed shen4brains closed 3 years ago

shen4brains commented 3 years ago

.feat directories are deposited in $PWD with names such as @@@.feat

report.html files within those @@@.feat directories indicate missing task-fMRI data for FEAT processing

shen4brains commented 3 years ago

Likely an issue with replacing '@@@' task-fMRI directory and filename variables with subject-specific "tfMRI" filename: see code starting here: https://github.com/McIntosh-Lab-RRI/tvb-ukbb/blob/8389751377840e74d9cb0f6a2fb5bece35707de5/bb_functional_pipeline/bb_prepare_tfMRI#L44

noahfl commented 3 years ago