Create basic 16S pipeline

McMinds-Lab / analysis_templates

Basic data analysis scripts to be modified for each project

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Create basic 16S pipeline #1

Closed rmcminds closed 2 years ago

rmcminds commented 3 years ago

Within /microbiomes, upload a script with basic 16S data processing using DADA2, from raw sequence data to an OTU table

santiagohern25 commented 3 years ago

Hello Dr. McMinds! I added the 16S Pipeline. Thank you!

Santiago

rmcminds commented 3 years ago

great! I see you created separate branches in your forked repository - I made a pull request to merge your other script into this repository; why don't you do it yourself for this one so we can test out that system? And I'll keep this issue open while I look over the code and see if there are any edits to talk about