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McTavishLab / physcraper

Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.
https://physcraper.readthedocs.io/en/main/
GNU General Public License v3.0
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reviewer 2 - comment 2 - clarify differences with existing tools #166

Closed LunaSare closed 3 years ago

LunaSare commented 3 years ago

"In this sense I see several alternative tools, that although doing phylogenetics from scratch also returns an 'updated' phylogeny (in less than 12 hours perhaps?):

https://github.com/AstrobioMike/GToTree https://github.com/ropensci/phylotaR https://github.com/dongzhang0725/PhyloSuite https://lmap-s.sourceforge.io/ https://github.com/dportik/SuperCRUNCH https://github.com/rdcrawford/cognac https://github.com/yangfangs/physpetools "

LunaSare commented 3 years ago

Maybe add a link to my comparison table here https://github.com/McTavishLab/physcraper_ms/blob/master/99-tools-review.md