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McTavishLab / physcraper

Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.
https://physcraper.readthedocs.io/en/main/
GNU General Public License v3.0
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add jupyter notebook to dockerfile #176

Open LunaSare opened 3 years ago

LunaSare commented 3 years ago

so we can read and run ipynb files from examples

LunaSare commented 3 years ago

Also:

snacktavish commented 3 years ago

https://stackoverflow.com/questions/38830610/access-jupyter-notebook-running-on-docker-container

Some useful info here. I think no virtual env required in docker, as it is sort of a virtual environment of it's own!

LunaSare commented 3 years ago

True! you are exactly right! I was trying different things and I forgot that physcraper does not exist on the command line, only in a python interactive session 😅

It is so nice to run physcraper in a docker container 🤩