Closed Memorablea closed 5 months ago
Shanghai/SCDC-HG1013-3778/2023|EPI_ISL_18465327|2023-10-11 JN.1.1> A4912G, T16461C from Switzerland
Shanghai/SCDC-HG1013-3785/2023|EPI_ISL_18465331|2023-10-12 JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf8:S103L) from UAE
BA.2.86.1> T11614C> G29449T Shanghai/SCDC-XG10-14573/2023|EPI_ISL_18475209|2023-10-08
如未注明,BA.2.86.1均默认指其C12815T分支
Yunnan/YNCDC-3270/2023|EPI_ISL_18488081|2023-10-23 云南省 BA.2.86.1> C7528T> G12332A(Orf1a:A4023T)> T28693C> C16409T(Orf1b:T981I)
Singapore/R78MR55/2023|EPI_ISL_18445258|2023-10-23 中国内地输出新加坡 JN.1.1> C21654T(S:S31F), C29311T
Singapore/R80MR71/2023|EPI_ISL_18473622|2023-10-31 中国香港输出新加坡 BA.2.86.1> C364T> C22993T> C2044A(Orf1a:N593K), G8353A, G25644A
Shanghai/SCDC-XG10-14798/2023|EPI_ISL_18495093|2023-10-16 上海市 BA.2.86.1> C364T> C22993T> A6777T(Orf1a:Y2171F), C12049T
Taiwan/CDC-C20439/2023 台湾地区 BA.2.86.1> C21034T(Orf1b:L2523F)> G1709A(Orf1a:A482T)
Taiwan/CDC-W33479/2023|EPI_ISL_18496174|2023-10-30 台湾地区越南输入 JN.2> G28378T> G3065A(Orf1a:G934S), C9491T(Orf1a:H3076Y)
Taiwan/CDC-W33590/2023|EPI_ISL_18496189|2023-11-03 台湾地区捷克输入 JN.1> G9424T, C15240T
Shanghai/SCDC-HG1027-3869/2023|EPI_ISL_18518355|2023-10-25 上海市,荷兰输入 JN.1> C1060T> A28104G(Orf8:I71V)> A3061G Shanghai/SCDC-HG1027-3871/2023|EPI_ISL_18518357|2023-10-25 上海市,德国输入 BA.2.86.1> T11614C> G29449T> C8266T Shanghai/SCDC-HG1031-3888/2023|EPI_ISL_18518369|2023-10-29 上海市,澳大利亚输入 JN.1> A9935G(Orf1a:T3224A)> A964G Shanghai/SCDC-HP-XG-1017-1/2023|EPI_ISL_18518388|2023-10-17 上海市黄浦区,本土 JN.3> C11575T> T27794C> G25687A(Orf3a:A99T)
Hong_Kong/VK23014485/2023|EPI_ISL_18526591|2023-10-10 香港特别行政区 深水埗区 BA.2.86.1> T11614C> C12085T
Taiwan/CDC-W33635/2023 台湾地区 芬兰输入 BA.2.86.3> C541T, C1528T, C11824T, A17267G(Orf1b:D1267G)> C6318T(Orf1a:P2018L), C11454T(Orf1a:A3730V), A25697T
Singapore/R85MR29/2023|EPI_ISL_18544491|2023-11-16 中国台湾输出新加坡 BA.2.86.1> C21034T(Orf1b:L2523F)> T3049C, G8102A(Orf1a:V2613I), G10943A(Orf1a:V3560I), C18086T(Orf1b:T1540I)> A19946G(Orf1b:K2160R) Singapore/R85MR222/2023|EPI_ISL_18544582|2023-11-19 中国台湾输出新加坡 JN.1.1> G1730A(Orf1a:E489K), C6494A(Orf1a:L2077I)
福建省福州市 台湾地区输入
Fujian/FCDC-FZ1512076401/2023|EPI_ISL_18556237|2023-11-09 Fujian/FCDC-FZ1512078401/2023|EPI_ISL_18556239|2023-11-09 JN.1> C9246T(Orf1a:A2994V), G20521A(Orf1b:D2352N)
Fujian/FCDC-FZ1512078001/2023|EPI_ISL_18556238|2023-11-09 JN.1> C9246T(Orf1a:A2994V), G20521A(Orf1b:D2352N)> C27532T(Orf7a:H47Y)
福建省+1 Fujian/FCDC-XM112805HG/2023|EPI_ISL_18580633|2023-11-22 福建省厦门市 澳大利亚输入 JN.1> T18471C> G15380T(Orf1b:S638I), A25575C(Orf3a:K61N)
台湾地区+5 Taiwan/CDC-W33951/2023|EPI_ISL_18591961|2023-11-13 越南输入 JN.1 Taiwan/CDC-W33907/2023|EPI_ISL_18591959|2023-11-12 泰国输入 JN.1> T18471C> C1441T Taiwan/CDC-F89587/2023|EPI_ISL_18591954|2023-11-12 JN.1 Taiwan/CDC-F89584/2023|EPI_ISL_18591952|2023-11-10 JN.1> T18471C Taiwan/CDC-W34185/2023|EPI_ISL_18591942|2023-11-22 菲律宾输入 JN.1.1> C9142T
Hong_Kong/VK23014552/2023|EPI_ISL_18598209|2023-11-14 香港特别行政区 元朗区 JN.1> A25327G> C10279T, T14440C(Orf1b:F325L) Hong_Kong/VK23014566/2023|EPI_ISL_18598211|2023-10-30 香港特别行政区 湾仔区 JN.2> T1030C> G20578T(Orf1b:V2371L), A29437G> C5175T(Orf1a:T1637I) Hong_Kong/VK23014564/2023|EPI_ISL_18598210|2023-11-4 香港特别行政区 东区 JN.3> C2939T(Orf1a:P892S)> C29171T(N:H300Y)> C13517T(Orf1b:T17I), T24079C
Hong_Kong/HKUSPH_VOC2249P3/2023|EPI_ISL_18604378|2023-06-16 香港 南区 疑似日期误标 BA.2.86> C9226T> G14347A(Orf1b:D294N)> C15108T> G1820A(Orf1a:G519S), T2277C(Orf1a:I671T), C4679T(Orf1a:P1472S), C6031T, A10518G(Orf1a:D3418G), T29454C
Fujian/FCDC-XM120605HG/2023|EPI_ISL_18608338|2023-12-05 福建省厦门市 新加坡输入 Fujian/FCDC-XM120607HG/2023|EPI_ISL_18608343|2023-12-05 福建省厦门市 澳大利亚输入 JN.1> G17278A(Orf1b:V1271T), T17279C(Orf1b:V1271T)> C5986T> T4265C, C8092T
Fujian/FCDC-XM120604HG/2023|EPI_ISL_18608336|2023-12-04 福建省厦门市 新加坡输入 JN.1.1>C9142T> C4540T, T17886A> C1825T, T3265C, G9841A, C27425T(Orf7a:T11I)
Singapore/R89MR154/2023|EPI_ISL_18604700|2023-12-01 中国台湾输出新加坡 JN.1> G17278A(Orf1b:V1271T), T17279C(Orf1b:V1271T)> C5986T
Singapore/R88MR37/2023|EPI_ISL_18611744|2023-11-28 中国内地输出新加坡 JN.1> G12907A> C5826T(Orf1a:T1854I), G7723A
Shanghai/SCDC-HG1123-4011/2023|EPI_ISL_18633998|2023-11-21 丹麦输入 JN.1.1> C9142T> G12070T> T1182C(Orf1a:V306A), C20389T(Orf1b:R2308C)
Shanghai/SCDC-HG1123-4016/2023|EPI_ISL_18634011|2023-11-21 德国输入 JN.1.1> C9142T> A15162G
Shanghai/SCDC-HG1123-4014/2023|EPI_ISL_18634017|2023-11-21 英国输入 JN.1.1> C11758T, T25631C(Orf3a:V80A), G25699T(Orf3a:A103S)
Shanghai/SCDC-HG1125-4026/2023|EPI_ISL_18634005|2023-11-23 新加坡输入 Shanghai/SCDC-HG1125-4029/2023|EPI_ISL_18634027|2023-11-23 新加坡输入 JN.1> G17278A(Orf1b:V1271T), T17279C(Orf1b:V1271T)> C5986T
Shanghai/SCDC-HG1125-4030/2023|EPI_ISL_18634015|2023-11-23 新加坡输入 JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf3a:S108L)> C28948T> C12778T> T14349A(Orf1b:D294E)
Shanghai/SCDC-HG1126-4039/2023|EPI_ISL_18633990|2023-11-24 俄罗斯输入 JN.1> C23896G> C20823T
Shanghai/SCDC-HG1128-4052/2023|EPI_ISL_18633992|2023-11-26 法国输入 JN.1> A6393G(Orf1a:D2043G), T11891C, T28135C(Orf8:V81A)
Shanghai/SCDC-HG1124-4023/2023|EPI_ISL_18634016|2023-11-22 德国输入 JN.1> G18803T(Orf1b:S1779I)
Shanghai/SCDC-HG1128-4053/2023|EPI_ISL_18633994|2023-11-26 阿联酋输入 JN.1
Shanghai/SCDC-HG1124-4020/2023|EPI_ISL_18634026|2023-11-22 泰国输入 BA.2.86.1> C29614T> C23601T(S:S680F)> C1282T, T15114C, C24863T(S:S1101Y)
Shanghai/SCDC-HG1128-4047/2023|EPI_ISL_18634028|2023-11-26 越南输入 BA.2.86.2 > T1507C
链接到https://github.com/Memorablea/COVID-19-/blob/Covid/BA.2.86.*%20from%20China.md ,此问题与.md文件保持更新
Fujian/FCDC-XM121302HG/2023|EPI_ISL_18647481|2023-12-06 from Singapore BA.2.86.1>G26101A(Orf3a:V237I), G26109T(Orf3a:E239D)
Fujian/FCDC-XM121306HG/2023|EPI_ISL_18647482|2023-12-11 from Australia BA.2.86.1> C26801T potential JN.1 dropout
Fujian/FCDC-XM121303HG/2023|EPI_ISL_18647483|2023-12-06 from Singapore BA.2.86.1> C26801T>T27810C(Orf7a:F19L) potential JN.1 dropout
Fujian/FCDC-XM121304HG/2023|EPI_ISL_18647485|2023-12-11 from Indonesia BA.2.86.1> C18894T> C7279T potential JN.1 dropout
Fujian/FCDC-XM121305HG/2023|EPI_ISL_18647486|2023-12-11 from Malaysia BA.2.86.1> C18894T> T8004A(Orf1a:V2580D) potential JN.1 dropout
Singapore/R92MR41/2023|EPI_ISL_18651325|2023-12-11 from Taiwan, China JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf3a:S108L)> C28948T> T7434C(Orf1a:F2390S), C16362T, A19212G
Singapore/R91MR99/2023|EPI_ISL_18651236|2023-12-07 from China(Mainland) JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf3a:S108L)> C28948T
USA/CA-GBW-H20-345-2232/2023|EPI_ISL_18656976|2023-12-09 from Taiwan, China JN.1> C774T(Orf1a:T170I)> T18453C> G13427A(Orf1a:E4388K)> C2268T(Orf1a:A668V), G6358T(Orf1a: E2031D), A13308G(Orf1a:K4348R), T26182C(Orf3a:Y264H)
Shanghai/SCDC-HG1204-4100/2023|EPI_ISL_18672168|2023-12-03 from UK JN.1.1> C9142T
Shanghai/SCDC-HG1205-4105/2023|EPI_ISL_18672172|2023-12-03 from Philippines JN.1.1> C9142T> G7829A(Orf1a:V2511I)
Shanghai/SCDC-HG1201-4077/2023|EPI_ISL_18672152|2023-11-29 from Netherlands JN.1.1> C9142T> A79T, C1960T, C3653A(Orf1a:L1130I)
Shanghai/SCDC-HG1202-4085/2023|EPI_ISL_18672157|2023-11-30 from Thailand JN.1.1> C9142T> A29412T(N:Q380L)> C18693T, C23422T, A29700G> C13431T(Orf1a:P4389L)> G16914T
Shanghai/SCDC-HG1202-4081/2023|EPI_ISL_18672154|2023-11-30 from Japan JN.1.1> C9166T> C12053T(Orf1a:L3930F)
Shanghai/SCDC-HG1205-4111/2023|EPI_ISL_18672177|2023-12-03 from HKSAR, China JN.1> C774T(Orf1a:T170I)> T18453C
Shanghai/SCDC-HG1203-4089/2023|EPI_ISL_18672159|2023-12-01 from Germany JN.1> C774T(Orf1a:T170I)> T18453C> C2536T, T21418C
Shanghai/SCDC-HG1204-4099/2023|EPI_ISL_18672167|2023-12-03 from UAE JN.1> C774T(Orf1a:T170I)> T18453C> C12242T(Orf1a:R3993C)
Shanghai/SCDC-HG1204-4096/2023|EPI_ISL_18672164|2023-12-03 from Germany JN.1> C774T(Orf1a:T170I)> T18453C> C15277T(Orf1b:H604Y)
Shanghai/SCDC-HG1205-4109/2023|EPI_ISL_18672175|2023-12-03 from Singapore JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf3a:S108L)> C28948T> A22116C(S:N185T)
Shanghai/SCDC-HG1201-4074/2023|EPI_ISL_18672150|2023-11-29 from UAE JN.1> C19186T, G25429T(Orf3a:V13L)> C18687T> A385T> G28347A(N:G25D, Orf9b:A22T)
Shanghai/SCDC-HG1202-4083/2023|EPI_ISL_18672156|2023-11-30 from France JN.1> T18738A(Orf1b:F1757L)
Shanghai/SCDC-HG1205-4110/2023|EPI_ISL_18672176|2023-12-03 from Singapore JN.1> G17278A(Orf1b:V1271T), T17279C(Orf1b:V1271T)> C5986T> C2485T, A16305G
Yunnan/YNCDC-3532/2023|EPI_ISL_18672386|2023-12-01 JN.1> C1593T(Orf1a:S443F), A19960G(Orf1b:T2165A)
Shanghai/SCDC-HG1203-4091/2023|EPI_ISL_18672161|2023-12-01 from Netherlands JN.2> C3736T
Yunnan/YNCDC-3493/2023|EPI_ISL_18672347|2023-11-27 JN.2> G28378T(Orf9b:R32L)> C2005T, C21846T(S:T95I), T27618C, A28877T, G28878C
Shanghai/SCDC-HG1202-4082/2023|EPI_ISL_18672155|2023-11-30 from South Korea BA.2.86.1> C2388T(Orf1a:T708I)
Shanghai/SCDC-HG1129-4060-2/2023|EPI_ISL_18672141|2023-11-27 from Japan BA.2.86.1> T11614C> G29449T
Yunnan/YNCDC-3495/2023|EPI_ISL_18672349|2023-11-27 BA.2.86.1> G24872T(S:V1104L)> C657T(Orf1a:A131V), G27762T(Orf7b:E3*)
Shanghai/SCDC-HG1204-4097/2023|EPI_ISL_18672165|2023-12-03 from Germany BA.2.86.1> C27679T(Orf7a:L96F)> C25803T
Fujian/FCDC-XM121904HG/2023|EPI_ISL_18686288|2023-12-15 from Italy JN.1
USA/WA-GBW-H20-345-3230/2023|EPI_ISL_18685166|2023-12-14 from China(Mainland) JN.1
Fujian/FCDC-XM121903HG/2023|EPI_ISL_18686287|2023-12-15 from Singapore JN.1> G17278A(Orf1b:V1271T), T17279C(Orf1b:V1271T)> C5986T> T6724C> G17523T(Orf1b:M1352I)
Fujian/FCDC-FZ15293816/2023|EPI_ISL_18686285|2023-12-16 from Taiwan, China JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf8:S103L)> A8420G(Orf1a:M2719V)> G12566A(Orf1a:V4101T), G26167T(Orf3a:V259L)
Fujian/FCDC-XM121906HG/2023|EPI_ISL_18686290|2023-12-18 from Australia JN.1> C24034T> A29700G> C19545T, C24370T> C5184T(Orf1a:P1640L)> T10084A, C23277T(S:T572I)
South_Korea/KDCA278107/2023|EPI_ISL_18687609|2023-12-10 from China(Mainland) JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf8:S103L)> T25842C> T24607C, C26044G(Orf3a:Q218E)
USA/CA-GBW-H20-353-2173/2023|EPI_ISL_18685169|2023-12-13 from Taiwan, China JN.1.1> C9142T> T27772C(Orf7b:L6S)
Singapore/R94MR134/2023|EPI_ISL_18701018|2023-12-18 from China(Mainland) BA.2.86.1> C29614T> C23601T(S:S680F)> T19893A(Orf1b:D2142E)> A1365G(Orf1a:K367R), C5979T(Orf1a:S1905F)> G25494T> C2788T, T24046C(S:P1263L), C25350T
Singapore/R93MR123/2023|EPI_ISL_18700929|2023-12-13 from Taiwan, China JN.1> C774T(Orf1a:T170I)> T18453C> C28201T(Orf3a:S108L)> C28948T
hCoV-19/Shanghai/SCDC-HG1207-4128/2023 | EPI_ISL_18703818 | 2023-12-05 JN.1 from Thailand hCoV-19/Shanghai/SCDC-HG1208-4134/2023 | EPI_ISL_18703824 | 2023-12-06 JN.1.1 from Philippines hCoV-19/Shanghai/SCDC-HG1208-4142/2023 | EPI_ISL_18703830 | 2023-12-06 BA.2.86.1 from Turkey hCoV-19/Shanghai/SCDC-HG1209-4148/2023 | EPI_ISL_18703834 | 2023-12-07 JN.1 from Japan hCoV-19/Shanghai/SCDC-HG1211-4165/2023 | EPI_ISL_18703840 | 2023-12-09 JN.1 from Thailand hCoV-19/Shanghai/SCDC-HG1211-4172/2023 | EPI_ISL_18703847 | 2023-12-10 JN.1 from Malaysia hCoV-19/Shanghai/SCDC-HG1212-4183/2023 | EPI_ISL_18703855 | 2023-12-10 JN.1 from Philippines
gisaid_hcov-19_2024_02_02_05.txt
2024年2月1日上传的34例本土序列 湖北+22(2/XDD),安徽+4 辽宁+4 福建+5
病例
Shanghai/SCDC-HG0908-3457/2023|EPI_ISL_18284814|2023-09-05,上海市,日本输入 BA.2.86.1> C26078T(Orf3a:T229I)> A10199C(Orf1a:M3312L)
Hong Kong/VK23013838/2023|EPI_ISL_18366378|2023-09-09,香港特别行政区 荃湾区 BA.2.86.1>C364T > C912A(Orf1a:S216Y), A14960T(Orf1b:N498I), C25350T(S:P1263L)
Fujian/FCDC-XM091701HG/2023|EPI_ISL_18330328|2023-09-17,福建省厦门市,台湾地区输入 JN.2> G29513T(N:A414S)> A21137G(Orf1b:K2557R), T22238C, C25714T(Orf3a:L108F)
Taiwan/CDC-W33195/2023|EPI_ISL_18458013|2023-10-20,台湾地区,日本输入 JN.1>T27056C