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Merck / BioPhi

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
https://biophi.dichlab.org/
MIT License
131 stars 44 forks source link

conda installation fails from README instructions #10

Closed rmrao closed 2 years ago

rmrao commented 2 years ago

Just a quick issue - following the conda installation instructions in the README fails with a strange glibc version error for me (I think it's related to this issue).

Looks like the problem is that you actually need the additional channels from the environment.yml file ( conda-forge and/or nodefaults) for the installation to succeed, so the command should be

conda install biophi -c bioconda -c conda-forge -c nodefaults

prihoda commented 2 years ago

Hi @rmrao thanks for reporting this. So just to clarify, you don't have conda-forge in your conda config --show channels ?

rmrao commented 2 years ago

No , just:

channels:
  - defaults

Possibly the difference between miniforge and miniconda?

prihoda commented 2 years ago

Ok I added instructions to add these channels: https://github.com/Merck/BioPhi/commit/6165cff554a640d36d69e2165f1e0cbe3a29b1fd