BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
I am trying to run the dev server using the instructions for development using docker compose. Once I try to build docker it fails at the stage => ERROR [biophi-main-web 6/9] RUN make env-update ENV_NAME=base with following error:
0 0.237 conda env update -n base -f environment.yml
I am also not able to install this package locally using Conda, as the package cannot be found (I specify bioconda as a source)
I thought that the problem is in hmmer package so I have downloaded its 3.1 version, located it in the BioPhi directory and added the installation to the docker file. This solved the hmmer problem but raised a lot of package incompatibility errors, which eventually leads to the same results -> docker fails to build. Is there a workaround how to make it work? Thanks a lot for any help.
P.S This is just a small part of error messages I receive:
I am trying to run the dev server using the instructions for development using docker compose. Once I try to build docker it fails at the stage => ERROR [biophi-main-web 6/9] RUN make env-update ENV_NAME=base with following error:
0 0.237 conda env update -n base -f environment.yml
0 0.718 Collecting package metadata (repodata.json): ...working... done
0 46.40 Solving environment: ...working... failed
0 46.40
0 46.40 ResolvePackageNotFound:
0 46.40 - hmmer[version='>=3.1']
0 46.40
0 49.63 make: *** [Makefile:12: env-update] Error 1
I am also not able to install this package locally using Conda, as the package cannot be found (I specify bioconda as a source)
I thought that the problem is in hmmer package so I have downloaded its 3.1 version, located it in the BioPhi directory and added the installation to the docker file. This solved the hmmer problem but raised a lot of package incompatibility errors, which eventually leads to the same results -> docker fails to build. Is there a workaround how to make it work? Thanks a lot for any help.
P.S This is just a small part of error messages I receive: