Meredith-Lab / volcalc

volcalc: Calculate Volatility of Chemical Compounds
https://meredith-lab.github.io/volcalc/
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Add Nannoolal et al. method #119

Open Aariq opened 2 months ago

Aariq commented 2 months ago

If we were to add another method besides SIMPOL.1, this paper would be a good one to look at: https://doi.org/10.1016/j.fluid.2008.04.020

Aariq commented 2 months ago

My impressions upon first reading:

Methods

Groups and SMARTS strings

Math

Summary

Overall this would be a significant undertaking because of 1) the large number of very specific SMARTS strings that would need to be created (unless the authors can help out), and 2) the major differences in how logP is calculated with this method. That is, it's not just a matter of adding a different table of SMARTS strings and coefficients! Seems probably do-able, but would want to replicate examples in Appendix B in a script first before thinking about anything else.