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Meredith-Lab / volcalc

volcalc: Calculate Volatility of Chemical Compounds
https://meredith-lab.github.io/volcalc/
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r-universe builds on macOS failing #74

Open Aariq opened 11 months ago

Aariq commented 11 months ago

r-universe builds of volcalc on macOS are failing, which is puzzling since it works on my mac and on our GitHub actions with macOS. Looks like a ChemmineOB installation issue: https://github.com/r-universe/cct-datascience/actions/runs/6354874446/job/17569286604

Aariq commented 11 months ago

I suspect examples might be failing because OpenBabel isn't included in the macOS version of ChemmineOB the way it is in the Windows version (confusing because the error message says ChemmineOB isn't available on Windows--an apparent bug). I don't think there is much we can do about this (see discussion here), but this will also be a problem with CRAN it seems. May need to conditionally skip running tests and examples on non-windows OS when OpenBabel isn't installed and pre-compute vignettes to avoid this build failure.

Aariq commented 8 months ago

Might just be that I need to copy the SystemRequirements field from ChemmineOB.

Aariq commented 8 months ago

Opened an issue with r-universe: https://github.com/r-universe-org/help/issues/329

Aariq commented 4 months ago

Currently this issue might be causing this problem: https://github.com/girke-lab/ChemmineOB/issues/35

barracuda156 commented 4 months ago

@Aariq Here is the fix: https://github.com/girke-lab/ChemmineOB/issues/35#issuecomment-2094885763