MetaCell / sckan-composer

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modify neurondm ingestion to filter out apinatomy population #298

Open ddelpiano opened 2 weeks ago

ddelpiano commented 2 weeks ago

we might want to implement a flexible filter, so that this can be reused in the future to filter out other KSs that are matching a certain criteria given, so that is not just apinatomy populations.

Priority: High

Acceptance criteria: The requirement is that we need to re-run the neurondm ingestion to get all the new non-apinatomy population in composer.

tgbugs commented 1 week ago

https://github.com/MetaCell/sckan-composer/blob/8e1476fdab9a1dd94264e830a5f61ef57cb6902f/backend/composer/services/cs_ingestion/neurondm_script.py#L442-L444 remove those files (comment out those apinat strings and you can probably comment out https://github.com/MetaCell/sckan-composer/blob/8e1476fdab9a1dd94264e830a5f61ef57cb6902f/backend/composer/services/cs_ingestion/neurondm_script.py#L452-L461 too).