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MetaSys-LISBP / IsoCor

IsoCor: Isotope Correction for mass spectrometry labeling experiments
https://isocor.readthedocs.io
GNU General Public License v3.0
24 stars 9 forks source link

Error invalid file #4

Closed bowenli37 closed 6 years ago

bowenli37 commented 6 years ago

On a Ubuntu 16.04 (64bit) OS with python 3.5, isocor was installed with pip. When I run isocor or python3 -m isocor in the terminal, a window popped out "Error: invalid file: PosixPath('/home/user/isocordb/Isotopes.dat')". The Isotopes.dat file is in the right folder and readable.

bdelepine commented 6 years ago

Hi @bowenli37, thank you for the bug report!

There was a compatibility issue with Python 3.5 and IsoCor v2.0.4. I just released v2.0.5 which should fix the problem.

Could you update your IsoCor version and reopen the issue if you still experience a problem?

pip install --upgrade isocor

IsoCor version should be v2.0.5.

Many thanks!