MetaboHUB-MetaToul-FluxoMet / RTMet

RTMet is a data workflow to process FIA-MS data coming from a bioreactor, find metabolites and fluxes, and send a feedback command to the system.
https://rtmet.readthedocs.io
GNU General Public License v3.0
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PDF/LaTeX build of the documentation fails #22

Open elliotfontaine opened 5 months ago

elliotfontaine commented 5 months ago

The LaTeX build of the documentation fails.

File "/home/docs/checkouts/readthedocs.org/user_builds/rtmet/envs/latest/lib/python3.12/site-packages/sphinx/writers/latex.py", line 785, in visit_desc_content
    assert self.in_desc_signature
           ^^^^^^^^^^^^^^^^^^^^^^
AssertionError

Exception occurred:
  File "/home/docs/checkouts/readthedocs.org/user_builds/rtmet/envs/latest/lib/python3.12/site-packages/sphinx/writers/latex.py", line 785, in visit_desc_content
    assert self.in_desc_signature
           ^^^^^^^^^^^^^^^^^^^^^^
AssertionError
The full traceback has been saved in /tmp/sphinx-err-dj3akq3d.log, if you want to report the issue to the developers.
Please also report this if it was a user error, so that a better error message can be provided next time.
A bug report can be filed in the tracker at <https://github.com/sphinx-doc/sphinx/issues>. Thanks!

This may be related to

As it occured after the rose config file autodoc was introduced by #20, it may be hard to debug if it's because of the exotic sphinx extensions. A fix could be found by simply changing sphinx / rtd versions.

This will require further investigation. For now, let's simply disable the PDF output.