MetaboHUB-MetaToul-FluxoMet / RTMet

RTMet is a data workflow to process FIA-MS data coming from a bioreactor, find metabolites and fluxes, and send a feedback command to the system.
https://rtmet.readthedocs.io
GNU General Public License v3.0
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Refactor `.raw` files detection #7

Closed elliotfontaine closed 3 months ago

elliotfontaine commented 3 months ago

History of the many tries to build a generic watchdog function for .raw files. At the end, it was decided to not implement remote watching, because of how Cylc xtriggers work. The workflow can look for .raw files either in the raws subdirectory of its run directory, or in a user-defined directory on the local filesystem. Moving raws files from the spectrometer to the workflow server is the burden of the user.