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Miaoyx323 / stCancer

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Do you have a tutorial of stCancer package? #1

Open GuangshengPei opened 2 years ago

GuangshengPei commented 2 years ago

Could you please show an example to run your package?

Miaoyx323 commented 2 years ago

Hi! I updated a brief sample code to run stCancer. I will upload more detailed usage in the near future. Thanks for your attention.

GuangshengPei commented 2 years ago

Thank you so much~! BTW, could you please also create another function to read h5 file only? e.g., stStatistics_h5, the dataPath used for including the filtered_feature_bc_matrix.h5? I got some samples with only .h5 files.

Miaoyx323 commented 2 years ago

Thanks for your advice~ I have updated the code. Now stStatistics can read the filtered_feature_bc_matrix.h5 by setting the parameter h5=TRUE.