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[BUGZILLA #7276] Re: Bug#275791: r-gnome: gnome library can not be read #2263

Closed MichaelChirico closed 4 years ago

MichaelChirico commented 4 years ago

From: Dirk Eddelbuettel <edd@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::>> Dear R bug fixers,

This came in early this morning. The R/Gnome configuration, and selection of libraries hat not changed one bit since I last built 1.9.1 -- but maybe something change in the Gmome/Glib/Gtk, or even x11, libraries? Would anyone know where RestoreAction is defined?

The list of Debian packages on which r-gnome depends is below; as this is computed from ldd output I won't add that direct ldd output, but would be glad to supply it as well as other information if it could aid in fixing this.

Thanks, Dirk

On Sun, Oct 10, 2004 at 11:41:41AM +0200, Wouter Leonard de Vries wrote:

Package: r-gnome
Version: 2.0.0-1
Severity: grave
Justification: renders package unusable

when trying to start r-gnome I get the following message:

Fatal error: The GNOME shared library could not be loaded.
The error was /usr/lib/R/modules/R_gnome.so: undefined symbol:
RestoreAction

-- System Information:
Debian Release: 3.1
APT prefers unstable
APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: i386 (i686)
Kernel: Linux 2.6.8.1
Locale: LANG=nl_NL, LC_CTYPE=nl_NL

Versions of packages r-gnome depends on:
ii  gdk-imlib1                1.9.14-16      imaging library for use with gtk
(
ii  libart2                   1.4.2-19       The GNOME canvas widget -
runtime 
ii  libaudiofile0             0.2.6-4        Open-source version of SGI's
audio
ii  libbz2-1.0                1.0.2-1        A high-quality block-sorting
file 
ii  libc6                     2.3.2.ds1-17   GNU C Library: Shared libraries
an
ii  libdb3                    3.2.9-20       Berkeley v3 Database Libraries
[ru
ii  libesd0                   0.2.34-1       Enlightened Sound Daemon -
Shared 
ii  libglade-gnome0           1:0.17-3       Library to load .glade files at
ru
ii  libglade0                 1:0.17-3       Library to load .glade files at
ru
ii  libglib1.2                1.2.10-9       The GLib library of C routines
ii  libgnome32                1.4.2-19       The GNOME libraries
ii  libgnomesupport0          1.4.2-19       The GNOME libraries (Support
libra
ii  libgnomeui32              1.4.2-19       The GNOME libraries (User
Interfac
ii  libgtk1.2                 1.2.10-17      The GIMP Toolkit set of widgets
fo
ii  libice6                   4.3.0.dfsg.1-8 Inter-Client Exchange library
ii  libncurses5               5.4-4          Shared libraries for terminal
hand
ii  libpcre3                  4.5-1.1        Perl 5 Compatible Regular
Expressi
ii  libreadline4              4.3-13         GNU readline and history
libraries
ii  libsm6                    4.3.0.dfsg.1-8 X Window System Session
Management
ii  libx11-6                  4.3.0.dfsg.1-8 X Window System protocol client
li
ii  libxext6                  4.3.0.dfsg.1-8 X Window System miscellaneous
exte
ii  libxi6                    4.3.0.dfsg.1-8 X Window System Input extension
li
ii  libxml1                   1:1.8.17-8     GNOME XML library
ii  r-base-core               2.0.0-1        GNU R core of statistical
computin
ii  xlibs                     4.3.0.dfsg.1-8 X Window System client libraries
m
ii  zlib1g                    1:1.2.2-1      compression library - runtime

-- no debconf information

-- Those are my principles, and if you don't like them... well, I have others. -- Groucho Marx

METADATA

MichaelChirico commented 4 years ago

From: Prof Brian Ripley <ripley@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::>> On Mon, 11 Oct 2004 edd@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::> wrote:

Dear R bug fixers,

This came in early this morning. The R/Gnome configuration, and selection of
libraries hat not changed one bit since I last built 1.9.1 -- but maybe
something change in the Gmome/Glib/Gtk, or even x11, libraries? Would anyone
know where RestoreAction is defined?

It was in bin/R.bin in 1.9.1, and is not in bin/exec/R in 2.0.0

gannet% nm -pg bin/R.bin | grep RestoreAction 0826da30 D RestoreAction

Grepping the sources shows it is defined in

src/main/startup.c:static SA_TYPE RestoreAction = SA_RESTORE; src/modules/gnome/system.c:extern SA_TYPE RestoreAction;

and removing the `static' solves this for me. I guess no alpha/beta tester used the GNOME interface ....

Fixed in R-patched and R-devel now.


The list of Debian packages on which r-gnome depends is below; as this is
computed from ldd output I won't add that direct ldd output, but would be
glad to supply it as well as other information if it could aid in fixing
this.

Thanks, Dirk

On Sun, Oct 10, 2004 at 11:41:41AM +0200, Wouter Leonard de Vries wrote:
> Package: r-gnome
> Version: 2.0.0-1
> Severity: grave
> Justification: renders package unusable
> 
> 
> when trying to start r-gnome I get the following message:
> 
> Fatal error: The GNOME shared library could not be loaded.
>   The error was /usr/lib/R/modules/R_gnome.so: undefined symbol:
>   RestoreAction
> 
> 
> -- System Information:
> Debian Release: 3.1
>   APT prefers unstable
>   APT policy: (500, 'unstable'), (1, 'experimental')
> Architecture: i386 (i686)
> Kernel: Linux 2.6.8.1
> Locale: LANG=nl_NL, LC_CTYPE=nl_NL
> 
> Versions of packages r-gnome depends on:
> ii  gdk-imlib1                1.9.14-16      imaging library for use with
gtk (
> ii  libart2                   1.4.2-19       The GNOME canvas widget -
runtime 
> ii  libaudiofile0             0.2.6-4        Open-source version of SGI's
audio
> ii  libbz2-1.0                1.0.2-1        A high-quality block-sorting
file 
> ii  libc6                     2.3.2.ds1-17   GNU C Library: Shared
libraries an
> ii  libdb3                    3.2.9-20       Berkeley v3 Database Libraries
[ru
> ii  libesd0                   0.2.34-1       Enlightened Sound Daemon -
Shared 
> ii  libglade-gnome0           1:0.17-3       Library to load .glade files
at ru
> ii  libglade0                 1:0.17-3       Library to load .glade files
at ru
> ii  libglib1.2                1.2.10-9       The GLib library of C routines
> ii  libgnome32                1.4.2-19       The GNOME libraries
> ii  libgnomesupport0          1.4.2-19       The GNOME libraries (Support
libra
> ii  libgnomeui32              1.4.2-19       The GNOME libraries (User
Interfac
> ii  libgtk1.2                 1.2.10-17      The GIMP Toolkit set of
widgets fo
> ii  libice6                   4.3.0.dfsg.1-8 Inter-Client Exchange library
> ii  libncurses5               5.4-4          Shared libraries for terminal
hand
> ii  libpcre3                  4.5-1.1        Perl 5 Compatible Regular
Expressi
> ii  libreadline4              4.3-13         GNU readline and history
libraries
> ii  libsm6                    4.3.0.dfsg.1-8 X Window System Session
Management
> ii  libx11-6                  4.3.0.dfsg.1-8 X Window System protocol
client li
> ii  libxext6                  4.3.0.dfsg.1-8 X Window System miscellaneous
exte
> ii  libxi6                    4.3.0.dfsg.1-8 X Window System Input
extension li
> ii  libxml1                   1:1.8.17-8     GNOME XML library
> ii  r-base-core               2.0.0-1        GNU R core of statistical
computin
> ii  xlibs                     4.3.0.dfsg.1-8 X Window System client
libraries m
> ii  zlib1g                    1:1.2.2-1      compression library - runtime
> 
> -- no debconf information

-- Brian D. Ripley, ripley@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ <CENSORING FROM DETECTED PHONE NUMBER ONWARDS; SEE BUGZILLA>

METADATA

MichaelChirico commented 4 years ago

NOTES: Fixed for 2.0.1

METADATA

MichaelChirico commented 4 years ago

Audit (from Jitterbug): Mon Oct 11 09:16:22 2004 ripley changed notes Mon Oct 11 09:16:22 2004 ripley moved from incoming to System-specific-fixed

METADATA

MichaelChirico commented 4 years ago

From: Dirk Eddelbuettel <edd@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::>> On Mon, Oct 11, 2004 at 08:15:43AM +0100, Prof Brian Ripley wrote:

On Mon, 11 Oct 2004 edd@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::> wrote:

> Dear R bug fixers,
> 
> This came in early this morning. The R/Gnome configuration, and selection
of
> libraries hat not changed one bit since I last built 1.9.1 -- but maybe
> something change in the Gmome/Glib/Gtk, or even x11, libraries? Would
anyone
> know where RestoreAction is defined?

It was in bin/R.bin in 1.9.1, and is not in bin/exec/R in 2.0.0

gannet% nm -pg bin/R.bin | grep RestoreAction
0826da30 D RestoreAction

Grepping the sources shows it is defined in 

src/main/startup.c:static SA_TYPE       RestoreAction = SA_RESTORE;
src/modules/gnome/system.c:extern SA_TYPE RestoreAction;

and removing the `static' solves this for me.  I guess no alpha/beta

Thanks you very much -- that minimal change also solves it for me. 

tester used the GNOME interface ....

Yup.

Fixed in R-patched and R-devel now.

And fixed Debian packages are being uploaded now.

Thanks again, Dirk



> 
> The list of Debian packages on which r-gnome depends is below; as this is
> computed from ldd output I won't add that direct ldd output, but would be
> glad to supply it as well as other information if it could aid in fixing
this.
> 
> Thanks, Dirk
> 
> 
> On Sun, Oct 10, 2004 at 11:41:41AM +0200, Wouter Leonard de Vries wrote:
> > Package: r-gnome
> > Version: 2.0.0-1
> > Severity: grave
> > Justification: renders package unusable
> > 
> > 
> > when trying to start r-gnome I get the following message:
> > 
> > Fatal error: The GNOME shared library could not be loaded.
> >   The error was /usr/lib/R/modules/R_gnome.so: undefined symbol:
> >   RestoreAction
> > 
> > 
> > -- System Information:
> > Debian Release: 3.1
> >   APT prefers unstable
> >   APT policy: (500, 'unstable'), (1, 'experimental')
> > Architecture: i386 (i686)
> > Kernel: Linux 2.6.8.1
> > Locale: LANG=nl_NL, LC_CTYPE=nl_NL
> > 
> > Versions of packages r-gnome depends on:
> > ii  gdk-imlib1                1.9.14-16      imaging library for use with
gtk (
> > ii  libart2                   1.4.2-19       The GNOME canvas widget -
runtime 
> > ii  libaudiofile0             0.2.6-4        Open-source version of SGI's
audio
> > ii  libbz2-1.0                1.0.2-1        A high-quality block-sorting
file 
> > ii  libc6                     2.3.2.ds1-17   GNU C Library: Shared
libraries an
> > ii  libdb3                    3.2.9-20       Berkeley v3 Database
Libraries [ru
> > ii  libesd0                   0.2.34-1       Enlightened Sound Daemon -
Shared 
> > ii  libglade-gnome0           1:0.17-3       Library to load .glade files
at ru
> > ii  libglade0                 1:0.17-3       Library to load .glade files
at ru
> > ii  libglib1.2                1.2.10-9       The GLib library of C
routines
> > ii  libgnome32                1.4.2-19       The GNOME libraries
> > ii  libgnomesupport0          1.4.2-19       The GNOME libraries (Support
libra
> > ii  libgnomeui32              1.4.2-19       The GNOME libraries (User
Interfac
> > ii  libgtk1.2                 1.2.10-17      The GIMP Toolkit set of
widgets fo
> > ii  libice6                   4.3.0.dfsg.1-8 Inter-Client Exchange
library
> > ii  libncurses5               5.4-4          Shared libraries for
terminal hand
> > ii  libpcre3                  4.5-1.1        Perl 5 Compatible Regular
Expressi
> > ii  libreadline4              4.3-13         GNU readline and history
libraries
> > ii  libsm6                    4.3.0.dfsg.1-8 X Window System Session
Management
> > ii  libx11-6                  4.3.0.dfsg.1-8 X Window System protocol
client li
> > ii  libxext6                  4.3.0.dfsg.1-8 X Window System
miscellaneous exte
> > ii  libxi6                    4.3.0.dfsg.1-8 X Window System Input
extension li
> > ii  libxml1                   1:1.8.17-8     GNOME XML library
> > ii  r-base-core               2.0.0-1        GNU R core of statistical
computin
> > ii  xlibs                     4.3.0.dfsg.1-8 X Window System client
libraries m
> > ii  zlib1g                    1:1.2.2-1      compression library -
runtime
> > 
> > -- no debconf information
> 
> 

-- 
Brian D. Ripley,                  ripley@<::CENSORED -- SEE ORIGINAL ON BUGZILLA::>
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
<CENSORING FROM DETECTED PHONE NUMBER ONWARDS; SEE BUGZILLA>

-----------

#### METADATA
 - Comment author - Jitterbug compatibility account
 - Timestamp - 2004-10-11 21:02:37 UTC