MicrobialDarkMatter / nanomotif

Nanomotif - a tool for identifying methylated motifs in metagenomic samples
MIT License
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Bipartite motif classified as ambiguous #12

Closed JSBoejer closed 2 months ago

JSBoejer commented 8 months ago

Nanomotif will classify a bipartite motif like this ACAYNNNNNNNTGNG as ambiguous. I guess it is due to the "N" within the recognition sequence in the second part of the motif. However, I would argue that it should be classified as bipartite.