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MicrobialDarkMatter / nanomotif

Nanomotif - a tool for identifying methylated motifs in metagenomic samples
MIT License
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installation MTase-linker #34

Closed MBiggel closed 1 month ago

MBiggel commented 5 months ago

I installed nanomotif via conda as described in the instructions.

Running nanomotif MTase-linker install gives nanomotif: error: argument command: invalid choice: 'MTase-linker' (choose from 'find-motifs', 'score-motifs', 'bin-consensus', 'complete-workflow', 'check-installation')

Does conda provide the current nanomotif version?

Thanks for fixing this, Michael

JSBoejer commented 5 months ago

Hello Michael,

Thank you for bringing this to our attention. You're correct that conda does not provide the current version of nanomotif (0.3.1), which include the MTase-linker module. We will look into it, and update the conda package ASAP.