This PR includes instructions on how to set up and configure a conda environment for paleomix.
It currently only covers the bam_pipeline, however extended it for the whole package would simply require appending extra tools (assuming on bioconda) to the command and/or paleomix_environment.yaml file, which is why I have put it in the Installation section of the documentation.
jfy133
commented
4 years ago
This PR includes instructions on how to set up and configure a conda environment for paleomix.
It currently only covers the
bam_pipeline, however extended it for the whole package would simply require appending extra tools (assuming on bioconda) to the command and/orpaleomix_environment.yamlfile, which is why I have put it in theInstallationsection of the documentation.