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MindfulMichaelJames / ProtegeDLAxiomPlugin

A plugin for Protégé that shows all Class Axioms of the selected class in Description Logic notation.
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Rendering in text mode only #5

Open zorgoz opened 3 years ago

zorgoz commented 3 years ago

Version 3.0.0 Protegé version: 5.5.0 OS: Windows 2016 x64 Java: JVM 1.8.0_121-b13 Memory: 466M Ontology edited: http://www.meteck.org/teaching/OEbook/ontologies/AfricanWildlifeOntology0.owl

The concept is not visualized in DL notation, some parts are even missing.

image

Such exceptions are visible in the console:

A selection model listener threw an error whilst handling a selection changed event: {} java.lang.StringIndexOutOfBoundsException: String index out of range: -7 at java.lang.String.substring(String.java:1967) ~[na:1.8.0_121] at za.ac.uct.cs.dlrenderer.StructureModifiers.splitExpression(StructureModifiers.java:43) ~[na:na] at za.ac.uct.cs.dlrenderer.StructureModifiers.splitExpression(StructureModifiers.java:39) ~[na:na] at za.ac.uct.cs.dlrenderer.StructureModifiers.owlToTree(StructureModifiers.java:12) ~[na:na] at za.ac.uct.cs.dlrenderer.DLAxiomRenderer.updateView(DLAxiomRenderer.java:73) ~[na:na] at za.ac.uct.cs.dlrenderer.DLAxiomRenderer.access$000(DLAxiomRenderer.java:40) ~[na:na] at za.ac.uct.cs.dlrenderer.DLAxiomRenderer$1.selectionChanged(DLAxiomRenderer.java:50) ~[na:na] at org.protege.editor.owl.model.selection.OWLSelectionModelImpl.fireSelectionChanged(OWLSelectionModelImpl.java:196) [protege-editor-owl.jar:na] at org.protege.editor.owl.model.selection.OWLSelectionModelImpl.updateSelectedObject(OWLSelectionModelImpl.java:183) [protege-editor-owl.jar:na] at org.protege.editor.owl.model.selection.OWLSelectionModelImpl.setSelectedObject(OWLSelectionModelImpl.java:170) [protege-editor-owl.jar:na] at org.protege.editor.owl.model.selection.SelectionPlaneImpl.transmitSelection(SelectionPlaneImpl.java:57) [protege-editor-owl.jar:na] at org.protege.editor.owl.ui.OWLWorkspaceViewsTab.transmitSelection(OWLWorkspaceViewsTab.java:101) [protege-editor-owl.jar:na] at org.protege.editor.owl.ui.view.AbstractOWLSelectionViewComponent.lambda$setGlobalSelection$5(AbstractOWLSelectionViewComponent.java:136) [protege-editor-owl.jar:na] at java.util.Optional.ifPresent(Optional.java:159) ~[na:1.8.0_121] at org.protege.editor.owl.ui.view.AbstractOWLSelectionViewComponent.setGlobalSelection(AbstractOWLSelectionViewComponent.java:136) [protege-editor-owl.jar:na] at org.protege.editor.owl.ui.view.AbstractOWLEntityHierarchyViewComponent.transmitSelection(AbstractOWLEntityHierarchyViewComponent.java:270) ~[protege-editor-owl.jar:na] at org.protege.editor.owl.ui.view.AbstractOWLEntityHierarchyViewComponent.lambda$initialiseView$2(AbstractOWLEntityHierarchyViewComponent.java:144) ~[protege-editor-owl.jar:na] at javax.swing.JTree.fireValueChanged(JTree.java:2927) ~[na:1.8.0_121] at javax.swing.JTree$TreeSelectionRedirector.valueChanged(JTree.java:3391) ~[na:1.8.0_121] at javax.swing.tree.DefaultTreeSelectionModel.fireValueChanged(DefaultTreeSelectionModel.java:635) ~[na:1.8.0_121] at javax.swing.tree.DefaultTreeSelectionModel.notifyPathChange(DefaultTreeSelectionModel.java:1093) ~[na:1.8.0_121] at javax.swing.tree.DefaultTreeSelectionModel.setSelectionPaths(DefaultTreeSelectionModel.java:294) ~[na:1.8.0_121] at javax.swing.tree.DefaultTreeSelectionModel.setSelectionPath(DefaultTreeSelectionModel.java:188) ~[na:1.8.0_121] at javax.swing.JTree.setSelectionPath(JTree.java:1634) ~[na:1.8.0_121] at javax.swing.plaf.basic.BasicTreeUI.selectPathForEvent(BasicTreeUI.java:2393) ~[na:1.8.0_121] at javax.swing.plaf.basic.BasicTreeUI$Handler.handleSelection(BasicTreeUI.java:3609) ~[na:1.8.0_121] at javax.swing.plaf.basic.BasicTreeUI$Handler.mousePressed(BasicTreeUI.java:3548) ~[na:1.8.0_121] at java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279) ~[na:1.8.0_121] at java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279) ~[na:1.8.0_121] at java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279) ~[na:1.8.0_121] at java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279) ~[na:1.8.0_121] at java.awt.AWTEventMulticaster.mousePressed(AWTEventMulticaster.java:279) ~[na:1.8.0_121] at java.awt.Component.processMouseEvent(Component.java:6530) ~[na:1.8.0_121] at javax.swing.JComponent.processMouseEvent(JComponent.java:3324) ~[na:1.8.0_121] at java.awt.Component.processEvent(Component.java:6298) ~[na:1.8.0_121] at java.awt.Container.processEvent(Container.java:2236) ~[na:1.8.0_121] at java.awt.Component.dispatchEventImpl(Component.java:4889) ~[na:1.8.0_121] at java.awt.Container.dispatchEventImpl(Container.java:2294) ~[na:1.8.0_121] at java.awt.Component.dispatchEvent(Component.java:4711) ~[na:1.8.0_121] at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4888) ~[na:1.8.0_121] at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4522) ~[na:1.8.0_121] at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4466) ~[na:1.8.0_121] at java.awt.Container.dispatchEventImpl(Container.java:2280) ~[na:1.8.0_121] at java.awt.Window.dispatchEventImpl(Window.java:2746) ~[na:1.8.0_121] at java.awt.Component.dispatchEvent(Component.java:4711) ~[na:1.8.0_121] at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:758) ~[na:1.8.0_121] at java.awt.EventQueue.access$500(EventQueue.java:97) ~[na:1.8.0_121] at java.awt.EventQueue$3.run(EventQueue.java:709) ~[na:1.8.0_121] at java.awt.EventQueue$3.run(EventQueue.java:703) ~[na:1.8.0_121] at java.security.AccessController.doPrivileged(Native Method) ~[na:1.8.0_121] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:80) ~[na:1.8.0_121] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:90) ~[na:1.8.0_121] at java.awt.EventQueue$4.run(EventQueue.java:731) ~[na:1.8.0_121] at java.awt.EventQueue$4.run(EventQueue.java:729) ~[na:1.8.0_121] at java.security.AccessController.doPrivileged(Native Method) ~[na:1.8.0_121] at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:80) ~[na:1.8.0_121] at java.awt.EventQueue.dispatchEvent(EventQueue.java:728) ~[na:1.8.0_121] at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:201) ~[na:1.8.0_121] at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) ~[na:1.8.0_121] at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) ~[na:1.8.0_121] at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) ~[na:1.8.0_121] at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) ~[na:1.8.0_121] at java.awt.EventDispatchThread.run(EventDispatchThread.java:82) ~[na:1.8.0_121]

ChristieAgatha commented 1 year ago

Hello, I have the same problem. Somebody have a solution, please?

CreativaeMentis commented 2 months ago

Hello, I have the same problem. Somebody have a solution, please?

Try to install Protege without any additional plugins in the beginning.