MiraldiLab / maxATAC

Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks
Apache License 2.0
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default for noramlize.md #85

Closed emiraldi closed 2 years ago

emiraldi commented 2 years ago

@tacazares Just in case a user circumvents maxATAC prepare and decides to use normalize on his or her own, let's set the default to min-max, "--max_percentile 99", so that they get the highest quality predictions with trained maxATAC models by default. (Make them work to likely poorer predictions with 100.)