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ModelSEED / Model-SEED-core

The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installation instructions and full feature documentation.
http://bionet.mcs.anl.gov/index.php/Model_SEED_Homepage
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the bootstrap shell script #21

Closed raphyz closed 13 years ago

raphyz commented 13 years ago

The first problem with this scirpt is that you need to clone the repository in order to see it, and it clones the repository with it.

The git clone command does not work for me for some reason, and I had to change the git clone command to: git clone https://user_name@github.com/ModelSEED/Model-SEED-core $INSTALL_DIR;

where user_name was changed to my user name.

I wonder if this will only be my problem.

samseaver commented 13 years ago

I think the issue you had with the git clone command might be that you have to save your public ssh key in your profile, have you done that?

Is there a neutral way for a user to git clone a public repository without even have to register as an account user?

raphyz commented 13 years ago

I have saved the ssh key,I think that this is not a problem.

I used https instead and it worked.

On 09/16/2011 11:59 PM, samseaver wrote:

I think the issue you had with the git clone command might be that you have to save your public ssh key in your profile, have you done that?

Is there a neutral way for a user to git clone a public repository without even have to register as an account user?

devoid commented 13 years ago

So the idea of this script is that it would be made available outside the repository for users to quickly get up and running. However it should be in the repository because it's code that we want to track and manage.

As for your git clone issue: one possibility is that I left off the .git suffix. If you do:

git clone git://github.com/ModelSEED/Model-SEED-core.git dir

Does that work? I'd be ok switching to the https or ssh version, but for these I think the user needs a github account.

samseaver commented 13 years ago

Yea

git clone git://github.com/ModelSEED/Model-SEED-core.git dir

works for me.

devoid commented 13 years ago

Seems to work now. Reopen if there's an issue.