ModelSEED / ModelSEEDDatabase

This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach
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Adding ontology attribute to database #150

Closed samseaver closed 5 years ago

samseaver commented 5 years ago

For the time being, we're including three different semantics:

class (wherein a generic or lumped compound/reaction is representative of one or more specific compounds/reactions), context (wherein a compound or reaction was added depending on the context of the imported metabolic reconstruction), and step (wherein a reaction is in fact a sub-reaction listed for a particular enzyme)