samseaver
commented
7 years ago I should add that, historically, the code for computing the "status" of a reaction would also re-balance it with additional protons if necessary. I've decided to make that a separate step. As you'll see, there's a couple of reactions for which the new status shows that only protons are missing, and I'll be writing a separate script/function that will add protons to the reactions to balance these out.
So I re-wrote the code for balancing reactions from Perl to Python, and, following on from the changes made to compound formula, very few of these had their statuses changed (33 reactions). For the most part, the changes are innocuous.
@mmundy42 and @JamesJeffryes can you spot-check a few of these changes, to make sure that they are directly attributed to the compounds involved, and not any possible bugs in my reaction balancing code.