ModelSEED / ModelSEEDDatabase

This repository contains the definitive copy of the biochemistry and metadata used to construct models using the ModelSEED/ProbAnno approach
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Rebuilding reactions #72

Closed samseaver closed 6 years ago

samseaver commented 6 years ago

So, as one of the last steps towards merging compounds, I wrote a set of functions for parsing and rebuilding a reaction, centered around the stoichiometry column (as the machine-readable format).

Running this on the reactions database changed some coefficient floats, some were appropriately rounded, others, it seems, hit the python limit for float size.

Anyway, review and merge when's convenient. Thanks