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MolClustPy
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SpringSaLaD-Python-Viz
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Import only what's necessary from Molclustpy
#30
Hlpred
opened
4 days ago
0
BNGL template to create SpringSalad input file
#29
vcellmike
opened
1 week ago
0
Weights accounting for cube of radius
#28
vcellmike
opened
1 week ago
0
Packaging at PyPi
#27
vcellmike
opened
2 weeks ago
1
Create SpringSaladPy organization
#26
vcellmike
opened
2 weeks ago
0
Radial saturation of clusters
#25
vcellmike
opened
2 weeks ago
0
Distance between centers of mass of molecules
#24
vcellmike
opened
2 weeks ago
0
Distance from membrane for centers of mass of molecules
#23
vcellmike
closed
1 week ago
0
Convertion of SpringSald file to BNGL
#22
vcellmike
opened
2 weeks ago
0
Visualization of molecules
#21
vcellmike
closed
1 week ago
0
Simulation parameters to be changed from Python
#20
vcellmike
closed
10 hours ago
0
Display the sites that correspond to each color
#19
Hlpred
closed
3 weeks ago
0
Titles for all plots, more examples
#18
vcellmike
opened
3 weeks ago
0
Fix folder structure for simulations
#17
Hlpred
opened
4 weeks ago
0
Identify clusters and find radius of gyration
#16
Hlpred
closed
2 weeks ago
0
Display files if requested
#15
Hlpred
closed
3 weeks ago
0
Make plots better presented (Average_z_pos)
#14
Hlpred
closed
3 weeks ago
0
Clean Up Project Reader
#13
Hlpred
closed
1 week ago
0
Fix Histogram Directory Path
#12
Hlpred
closed
3 weeks ago
0
Histogram time rounded to the nearest time
#11
vcellmike
closed
3 weeks ago
0
Visualization of cluster ciomposition
#10
vcellmike
opened
1 month ago
0
Additional time courses
#9
vcellmike
closed
3 weeks ago
0
The molecular composition of the clusters, giving the relative fraction of each molecular type within a given cluster size.
#8
vcellmike
closed
2 weeks ago
0
Reproduce Figure 1G for SpringSalad: average number of bonds per site and per molecule
#7
vcellmike
opened
1 month ago
1
Histogram for AOC
#6
vcellmike
closed
4 weeks ago
1
Timeplot for spatial positions of the molecular sites
#5
vcellmike
closed
3 weeks ago
5
Processing results, no statistics yet
#4
vcellmike
closed
3 weeks ago
0
Process more info but use flags
#3
vcellmike
closed
3 weeks ago
0
SITE capitalization
#2
vcellmike
closed
1 month ago
0
Code style
#1
vcellmike
opened
1 month ago
0