Update QC thresholds and remove unnecessary comments

Molmed / checkQC

CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

http://checkqc.readthedocs.io/

GNU General Public License v3.0

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Closed matrulda closed 4 years ago

matrulda commented 4 years ago

Updated QC thresholds according to changes in INS-00123. Also, only kept threshold comments for one read length to reduce duplication.

Tested on a Miseq with read length 301 bp and I could confirm that the new thresholds was used.