codecov[bot]
commented
1 year ago Codecov Report
Base: 100% // Head: 100% // Decreases project coverage by -1% :warning:
Coverage data is based on head (
b34b3a8) compared to base (1e2c079). Patch coverage: 100% of modified lines in pull request are covered.
Additional details and impacted files
```diff @@ Coverage Diff @@ ## master #10 +/- ## ===================================== - Coverage 100% 100% -0% ===================================== Files 5 5 Lines 166 262 +96 ===================================== + Hits 166 261 +95 - Misses 0 1 +1 ``` | [Impacted Files](https://codecov.io/gh/Molmed/fastq_demux/pull/10?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed) | Coverage Δ | | |---|---|---| | [fastq\_demux/parser.py](https://codecov.io/gh/Molmed/fastq_demux/pull/10/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed#diff-ZmFzdHFfZGVtdXgvcGFyc2VyLnB5) | `99% <98%> (-1%)` | :arrow_down: | | [fastq\_demux/demux.py](https://codecov.io/gh/Molmed/fastq_demux/pull/10/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed#diff-ZmFzdHFfZGVtdXgvZGVtdXgucHk=) | `100% <100%> (ø)` | | | [fastq\_demux/fastq\_demux.py](https://codecov.io/gh/Molmed/fastq_demux/pull/10/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed#diff-ZmFzdHFfZGVtdXgvZmFzdHFfZGVtdXgucHk=) | `100% <100%> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=Molmed):umbrella: View full report at Codecov.
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This PR introduces the feature to use sequenced barcodes supplied as FASTQ files, rather than parsing the barcodes from each read's header.
In addition, it allows specifying number of allowed mismatches to the barcode. In case of actual barcode collisions an exception will be thrown.