Closed Yyeserin closed 1 year ago
Hi!
Yes, it is now possible to allow mismatches in the index. Just use the --mismatches N
parameter, where N
is the number of mismatches to allow. Note that you will get an exception in case there are index collisions as a consequence.
See also fastq_demux --help
Hello,
I wonder if the software allows some mismatches between the barcodes in the list and on the headers? E.g. allowing 1 bp mismatch? I couldn't see such an option on the website. But maybe it is there.
Best, Yeserin.