as_df() mixes up factors

[QGouil]

I made a Coo object with a bunch of factors. imgCoo <- Out(img, fac = data.frame(lat = lat, type = type, line = line)) All is well, I can align and get the EFDs, but if I try to export the coefficients with df <- as_df(img.f) the factors get mixed up: a wild-type sample, correctly labeled as such in imgCoo and img.f, can end up being labelled mutant in df. Something like cbind(img.f$fac, img.f$coe) %>% gather('A1','B1',...,'Dn', key = 'coefficient', value = 'value') should work. Cheers.

[vbonhomme]

thanks. will check that and I'm reviewing everything anyway these days. cheers.

2018-02-01 1:59 GMT+01:00 QGouil notifications@github.com:

I made a Coo object with a bunch of factors. imgCoo <- Out(img, fac = data.frame(lat = lat, type = type, line = line)) All is well, I can align and get the EFDs, but if I try to export the coefficients with df <- as_df(img.f) the factors get mixed up: a wild-type sample, correctly labeled as such in imgCoo and img.f, can end up being labelled mutant in df. Something like cbind(img.f$fac, img.f$coe) %>% gather('A1','B1',...,'Dn', key = 'coefficient', value = 'value') should work. Cheers.

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[vbonhomme]

should be fixed now. Thanks for that.