MonashBI arcana-legacy issues

MonashBI / arcana-legacy

Abstraction of Repository-Centric ANAlysis - a Python framework

Apache License 2.0

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Handle multiple file formats as separate resources in XNAT repository

#134 tclose opened 3 years ago
0
Construct "directory" formats from nested file formats

#133 tclose opened 3 years ago
0
Add option to override mismatching provenance

#132 tclose opened 4 years ago
0
Check extension of pipeline output matches specified format

#131 tclose opened 4 years ago
0
Remove SwitchSpec in favour of ParamSpec

#130 tclose closed 4 years ago
0
Dynamic menus

#129 tclose closed 4 years ago
0
Allow extensions in short form of inputs (i.e. dictionary)

#128 tclose opened 4 years ago
0
Change name of 'data' method to 'derive'

#127 tclose closed 4 years ago
0
Add 'category' kwarg to data specs

#126 tclose closed 4 years ago
0
Get rid of InputFileset|FieldSpec in favour of Fileset|FieldSpec

#125 tclose closed 4 years ago
0
Change name of InputFilesets|Fields to FilesetFilter FieldFilter

#124 tclose closed 4 years ago
0
Change name of Study to Analysis

#123 tclose closed 4 years ago
0
Field inputs to nodes should use traits rather than native Python types

#122 tclose opened 4 years ago
0
Check inputs against trait types to see whether they are compatible

#121 tclose opened 4 years ago
0
Add "latest" version to init method of requirement objects

#120 tclose opened 4 years ago
0
Create a "Dataset" class that defines a dataset within a repository

#119 tclose closed 4 years ago
0
"Cache" format conversions within the output repository

#118 tclose opened 4 years ago
0
bugfixes related to sinking subdirectories

#117 apoz00003 closed 5 years ago
1
Pylint error debugging and dropping of Python 2 support

#116 tclose closed 5 years ago
0
Should account for name_maps in Study.provided methods

#115 tclose opened 5 years ago
0
Updates to get banana entrypoint to work

#114 tclose closed 5 years ago
1
Reuse input conversions across different sub-pipelines of a requested workflow

#113 tclose opened 5 years ago
0
Added acceptable quality option to InputFileset

#112 tclose closed 5 years ago
1
Bugfixes

#111 tclose closed 5 years ago
2
Add convenient mechanism to iterate over sessions (i.e. without manual joining)

#110 tclose opened 5 years ago
0
fixed bug in Study provenance when subject and visit ids are provided

#109 tclose closed 5 years ago
1
Renamed Fileset|FieldInput to InputFileset|Field

#108 tclose closed 5 years ago
1
Decentralised file formats

#107 tclose closed 5 years ago
1
Define file format converters in separate 'add_converter' method

#106 tclose opened 5 years ago
0
Should move registration of file formats to repository class

#105 tclose opened 5 years ago
0
Enable custom summary directory names

#104 tclose opened 5 years ago
0
Change provenance ignore/include to JSONPath syntax

#103 tclose opened 5 years ago
0
Implement DockerEnv and SingularityEnv environment modules

#102 tclose opened 5 years ago
0
Class renaming

#101 tclose closed 5 years ago
1
Move spec name out of Selector (Input) __init__ and only assign when bound to study

#100 tclose opened 5 years ago
0
Detect version from git sha's

#99 tclose opened 5 years ago
1
Multiple sub-study groups (e.g. test and control)

#98 tclose opened 5 years ago
1
Allow multiple file formats in selector objects

#97 tclose opened 5 years ago
0
updated/fixed documentation [ci skip]

#96 tclose closed 5 years ago
0
Fileset "side-cars"

#95 tclose closed 5 years ago
0
Implement range of changes to match changes for Banana 0.2.5

#94 tclose closed 5 years ago
1
Rework StudyMetaClass to pick up data/parameter specs from add_data_specs

#93 tclose opened 5 years ago
0
Implemented 'skip missing' and 'fallback to default' functionality to *Selectors

#92 tclose closed 5 years ago
1
Switch keys and values in outputs dictionary in pipeline.add method

#91 tclose opened 5 years ago
0
Maximum cache size for XnatRepository

#90 tclose opened 5 years ago
0
Improve performance of XNAT queries in study initialisation

#89 tclose closed 5 years ago
1
Collect all reprocess exceptions before raising them

#88 tclose opened 5 years ago
0
Add unittest to test conditional check of subject/visit IDs in provenance depending on node frequency

#87 tclose opened 5 years ago
0
Provenance

#86 tclose closed 5 years ago
1
Implements provenance storage and checking

#85 tclose closed 5 years ago
1