tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.
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CWL: new bowtie options, small improvements to bowtie Run Config #178
Closes #160 Closes #177
Options added to CWL and Run Config:
Options removed from Run Config and Workflow:
The
norc
option had a partial CWL implementation. It has also been corrected.