tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.
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Counter and Plotter: N bases are now reported and plotted (if present) in len_dist outputs #199
This PR introduces proper handling of non-nucleotide bases in SAM files. If present, these bases are now reported in corresponding nt_len_dist tables, and are shown in len_dist plots with a gray color.
This PR also includes a minor bugfix for how Plotter parses condition_and_rep from nt_len_dist filenames
This PR introduces proper handling of non-nucleotide bases in SAM files. If present, these bases are now reported in corresponding nt_len_dist tables, and are shown in len_dist plots with a gray color.
This PR also includes a minor bugfix for how Plotter parses condition_and_rep from nt_len_dist filenames
Closes #196