tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.
GNU General Public License v3.0
1
stars
1
forks
source link
Plotter: outputs are organized into subdirectories by type #239
Outputs of tiny-plot are now organized into subdirectories. Directories are created only for the plots requested, and only once a plot is complete and ready to be saved.
PCA plots are placed in the root level of the tiny-plot output directory rather than their own subdirectory. This is because there will always be just one PCA plot, whereas all other plot types will have multiple outputs with a sufficient number of groups and replicates. These changes also open up opportunities for downstream steps to further process tiny-plot outputs.
taimontgomery
commented
2 years ago
Outputs of tiny-plot are now organized into subdirectories. Directories are created only for the plots requested, and only once a plot is complete and ready to be saved.
PCA plots are placed in the root level of the tiny-plot output directory rather than their own subdirectory. This is because there will always be just one PCA plot, whereas all other plot types will have multiple outputs with a sufficient number of groups and replicates. These changes also open up opportunities for downstream steps to further process tiny-plot outputs.
Closes #233