tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.
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Pipeline: new location and scope of Source Filter and Type Filter #244
Source and Type filters
These filters currently apply across all input GFF files, but we would like to change them so that they can be applied on a per-rule basis during Stage 1 selection. For this they will be moved from the Run Config to the Features Sheet. They will also be extended to support wildcard values.
Source and Type filters These filters currently apply across all input GFF files, but we would like to change them so that they can be applied on a per-rule basis during Stage 1 selection. For this they will be moved from the Run Config to the Features Sheet. They will also be extended to support wildcard values.