tinyRNA provides an all-in-one solution for precision analysis of sRNA-seq data. At the core of tinyRNA is a highly flexible counting utility, tiny-count, that allows for hierarchical assignment of reads to features based on positional information, extent of feature overlap, 5’ nucleotide, length, and strandedness.
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Pipeline: use longer/descriptive argument format in CommandLineTools #289
The workflow runner reports the arguments used for each command during pipeline execution. The CommandLineTool for each step was written to use the short version of optional argument flags. We think it would be more helpful if the longer version was used, if available. This will make the pipeline output more informative.
The workflow runner reports the arguments used for each command during pipeline execution. The CommandLineTool for each step was written to use the short version of optional argument flags. We think it would be more helpful if the longer version was used, if available. This will make the pipeline output more informative.