AlexTate
commented
10 months ago Hi @vicgarcas, that's an interesting issue!
When Conda is installed it adds a snippet to ~/.zshrc that enables the use of the conda command in your terminal. What I'm seeing is that setup.sh found the snippet, but for some reason the script wasn't able to use the conda command. This sometimes happens if Conda was recently installed and you haven't restarted your terminal before running setup.sh.
I would first recommend that you fully quit the terminal app (⌘ + Q), relaunch it, and try the installation again. If that doesn't help, would you mind responding with the output of the following commands for further troubleshooting?
conda --versionps -p $$
vicgarcas
Basic description of the error
I'm trying to install tinyRNA and upon running ./setup.sh I get the following response from the terminal:
✓ macOS detected ✓ Xcode command line tools are already installed ✓ Conda is already installed for zsh ./setup.sh: line 119: conda: command not found ./setup.sh: line 149: conda: command not found Setting up tinyrna environment (this may take a while)... ./setup.sh: line 64: conda: command not found ⃠ tinyrna environment setup failed Console output has been saved to env_install.log.
Environment
Operating System: Mac OS Ventura 13.4 tinyrna version: v1.5 Additional comments:
I have minimal command-line computing skills, I apologise in advance if the error is due to something very basic that I should've taken into account.
Thanks!