MooersLab / EasyPyMOL

Script to facilitate the making of horizontal scripts
GNU General Public License v3.0
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GitHub topics #12

Closed wibeasley closed 5 years ago

wibeasley commented 6 years ago

@bmooers, there's a chance that adding some topics might help.

A more thorough search is probably justified. But after spending a few minutes I'd suggest considering

  1. pymol
  2. protein
  3. peptides
  4. python
  5. pdb?
  6. would pymol-plugin apply?

There are also a bunch of xray-ish topics that might be good like xray-crystallography. Scan the three pages of https://github.com/search?p=1&q=xray&type=Topics

bmooers commented 6 years ago

Yes those topics would help along with

PyMOL PyMOL macro language pml pml scripts pymol scripts pymol scrpting RNA structure protein structure protein structure analysis protein visualization protein structure visualization protein structure bioinformatics

molecular graphics molecular image making molecular visualization molecular biophysics

Best regards,

Blaine

Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine University of Oklahoma Health Sciences Center S.L. Young Biomedical Research Center (BRC) Rm. 466 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419

office: (405) 271-8300 lab: (405) 271-8313 e-mail: blaine-mooers@ouhsc.edu mailto:blaine-mooers@ouhsc.edu alternate e-mail: bmooers1@gmail.com mailto:bmooers1@gmail.com

Faculty webpage: https://tinyurl.com/BMBmooers Google Scholar: https://tinyurl.com/GSbmooers SSRL User Executive Committee: https://www-ssrl.slac.stanford.edu/content/about-ssrl/advisory-panels/ssrl-users-organization SSRL-LCLS User Meeting: https://conf.slac.stanford.edu/ssrl-lcls-2018/ EasyPyMOL: https://github.com/MooersLab Molecular Graphics Course Links: https://tinyurl.com/molgr Small Angle Scattering Links: https://tinyurl.com/ouhscsaxs X-ray lab (LBSF): https://tinyurl.com/ouhsclbsf


From: Will Beasley [notifications@github.com] Sent: Thursday, October 04, 2018 11:13 AM To: MooersLab/EasyPyMOL Cc: Mooers, Blaine H.M. (HSC); Mention Subject: [EXTERNAL] [MooersLab/EasyPyMOL] GitHub topics (#12)

@bmooershttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_bmooers&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=LgO20JSyQEDUYewgaFv--xlYZkK9VfYfVpR_UtEpEE4&e=, there's a chance that adding some topicshttps://urldefense.proofpoint.com/v2/url?u=https-3A__blog.github.com_2017-2D01-2D31-2Dintroducing-2Dtopics_&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=_R0ecfpQWRnQowP36b9MSRrwyfjMr_TBub1ZWimxTEQ&e= might help.

A more thorough search is probably justified. But after spending a few minutes I'd suggest considering

  1. pymolhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_pymol&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=uqd5HOr74qCfsWMQ8zrM60nz9NGQy6uxUg0RDZ8wOYk&e=
  2. proteinhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_protein&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=fHDfk8M5p-0aCtZk5p8Ag1jxzdXDavgLwG3Sr7Lgi9o&e=
  3. peptideshttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_peptides&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=x5kzuQQ7KQTPqdmfWSeVWoEC_IIi1XJnOj5wE-c55i0&e=
  4. pythonhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_python&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=3wT1anaztQcZUzU8L3dzwD3StCBe51Y3im8NmwtfRSo&e=
  5. pdbhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_pdb&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=I2qJXR2Hky_SN8oK-xpBeqi_86gU5LOBfz6KI_dsGVk&e=?
  6. would pymol-pluginhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_pymol-2Dplugin&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=IQlpjd7PGOEmXEObUG0sqQoG42Hto3c1EhVS1n9Ar5s&e= apply?

There are also a bunch of xray-ish topics that might be good like xray-crystallographyhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_topics_xray-2Dcrystallography&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=wtTxDtsRNws2hQkxcS3YSuhPILpEQ1J9F3GOpLgFgiI&e=. Scan the three pages of https://github.com/search?p=1&q=xray&type=Topicshttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_search-3Fp-3D1-26q-3Dxray-26type-3DTopics&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=dIEwwdTsYk_8BQmIbaYHin0RYHlaPAAYsYUi7glzQe0&e=

— You are receiving this because you were mentioned. Reply to this email directly, view it on GitHubhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_MooersLab_EasyPyMOL_issues_12&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=WDJ4qxvjp5iUY6hlBNQoBkcbkr9QWP6nvzwX5FC3T7c&e=, or mute the threadhttps://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_notifications_unsubscribe-2Dauth_ABJNx4iO6byNCGyjEQgCRMd8V-5FQFQgkkks5uhjOPgaJpZM4XIce4&d=DwMCaQ&c=VjzId-SM5S6aVB_cCGQ0d3uo9UfKByQ3sI6Audoy6dY&r=k0gMbcsdOcdbPUNV5tW66KQSZfXL0ewVDPVBp7tqbks&m=p8aQtTN4ecwrHb7QdjcOrSxFTxfHQKM48lDvvBfZ6mg&s=zXwbr67VP30XrhADZ78I-nWCiVXDMwpHAR3irQ-oY9I&e=.

MooersLab commented 5 years ago

Finally added some topics.