clarifying Config setup

pmorrell commented 8 years ago

Type of issue

[ ] Bug
[ ] Feature request

Bugs

Have you looked at the wiki?

The wiki is located here

[X] Yes
[ ] No
Which handler are you having trouble with?

Config

Describe your problem

On lines 34-36 of Config, it is not clear what delimiter should be used among columns? Should they be tab or space delimited?

What is the error message being generated?

None

# Put your error message here

Copy the part of the config file used by this handler

#   Shared values go here

#   Handler-specific values go here

#   Dependency definitions go here

Has anyone else been able to replicate your error?

[ ] Yes
[X] No

Feature requests

What new thing is being added?

[ ] New handler
[ X] Modification to handler
Describe the changes made

Where does this fit in with the existing pipeline?

List any dependencies that will be needed for this change, providing links to the source code as needed

Do you have a script for this change? Please note that we can implement your code faster if you write everything as BASH functions.
[ ] Yes
[ ] No

If yes, please make sure the code is posted online and link to it below:

name of code exerpt

Good hosting sites are GitHub and GitHub Gist.

Thank you for your help improving `sequence_handling`!

mojaveazure commented 8 years ago

Please see response for #23 regarding variables for GBS_Demultiplex

Aerin13 commented 7 years ago

The lines in Config that you reference are related to GBS Demultiplexing, which is still incomplete. Since the Config file for this handler will almost definitely change before it is released, I'm closing this issue.

MorrellLAB / sequence_handling