Indel realignment parameters

MorrellLAB / sequence_handling

A series of scripts to automate sequence workflows

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Indel realignment parameters #35

Closed ChaochihL closed 6 years ago

ChaochihL commented 6 years ago

Please add a feature that allows users to modify GATK Indel Realignment --entropyThreshold and --LODThresholdForCleaning parameters in the config file.

Aerin13 commented 6 years ago

This issue has been fixed in the latest commit.