MoseleyBioinformaticsLab / ICIKendallTau

Information-Content-Informed Kendall-tau in R
https://moseleybioinformaticslab.github.io/ICIKendallTau/
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Compare mds of ICI-Kt values to PCA on the same data. #10

Open rmflight opened 1 year ago

rmflight commented 1 year ago

Can we use MDS of ICI-Kt values instead of heatmaps for visualization and determining where things may be broken down or where the outliers are?

Heatmaps can be hard to read, need re-ordering, etc. MDS should ideally still highlight if there are outliers, or allow us to calculate distances that would highlight outliers more easily.