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MoseleyBioinformaticsLab
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visualizationQualityControl
Visualization methods for omics dataset quality control
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statistical test of left censorship
#31
rmflight
closed
6 months ago
3
updates main functionality to columnar samples
#30
rmflight
closed
8 months ago
0
keep_non_zero_percentage should work with either 0 or NA
#29
rmflight
opened
10 months ago
0
reject outliers that are at the top of the distribution
#28
rmflight
closed
1 year ago
2
Alternative correlation visualization
#27
rmflight
closed
10 months ago
2
Update quality-control vignette to use ici_kendalltau
#26
rmflight
closed
2 years ago
1
Mergesort
#25
rmflight
closed
3 years ago
0
try the direction differences in pure R
#24
rmflight
closed
3 years ago
1
Rusty kendall matrix
#23
CGMossa
closed
3 years ago
11
`x[i]` should be replaced with `x2[i]`, and so on and so forth
#22
CGMossa
closed
4 years ago
1
Check results between parallel and sequential versions
#21
rmflight
closed
4 years ago
0
Sign kt
#20
rmflight
closed
4 years ago
0
Update ici-kendalltau.Rmd
#19
hunter-moseley
closed
4 years ago
0
Added (local) kendall tau
#18
CGMossa
closed
3 years ago
6
Use list of comparisons for correlation splitup
#17
rmflight
closed
4 years ago
1
switch to ggfortify for PCA
#16
rmflight
closed
4 years ago
1
Generate distribution of feature prevalence within and across sample classes
#15
rmflight
opened
7 years ago
0
weight correspondence by feature prevalence
#14
rmflight
opened
7 years ago
0
PCA using the augmented correlation matrix
#13
rmflight
opened
7 years ago
5
option to weight correlation by jaccard metric
#12
rmflight
closed
7 years ago
1
add option to set NA's to zero automatically
#11
rmflight
opened
8 years ago
0
generate a warning if there are NA's from pairwise_correlation
#10
rmflight
opened
8 years ago
0
calculate % of features unique to a sample
#9
rmflight
opened
8 years ago
5
Add a Gitter chat badge to README.md
#8
gitter-badger
closed
8 years ago
0
combined score from both med_cor and feature_outlier
#7
rmflight
closed
3 years ago
1
outlier_fraction does not use actual sample ids
#6
rmflight
closed
8 years ago
0
option to add sample ids to visqc_pca
#5
rmflight
closed
8 years ago
1
?outlier_fraction
#4
jesudk2
closed
8 years ago
2
Median Correlation Vignette
#3
jesudk2
opened
8 years ago
1
Vignette Correlation Section issue
#2
jesudk2
closed
8 years ago
0
rename filter_nonzero to keep_nonzero
#1
rmflight
closed
8 years ago
0