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Mouse-Imaging-Centre / RMINC

Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and writing of MINC volumes, running voxel-wise linear models, correlations, etc.; correcting for multiple comparisons using the False Discovery Rate, and more. With contributions from Jason Lerch, Chris Hammill, Jim Nikelski and Matthijs van Eede. Some additional information can be found here:
https://mouse-imaging-centre.github.io/RMINC
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VoxelStats tool to steal methods from #85

Open gdevenyi opened 8 years ago

gdevenyi commented 8 years ago

Just released for MATLAB, supports minc

http://journal.frontiersin.org/article/10.3389/fninf.2016.00020/full

jasonlerch commented 8 years ago

Speed is one thing not to steal, however :)

From: "Gabriel A. Devenyi" notifications@github.com Reply-To: Mouse-Imaging-Centre/RMINC reply@reply.github.com Date: Wednesday, June 15, 2016 at 8:49 AM To: Mouse-Imaging-Centre/RMINC RMINC@noreply.github.com Subject: [Mouse-Imaging-Centre/RMINC] VoxelStats tool to steal methods from (#85)

Just released for MATLAB, supports minc

http://journal.frontiersin.org/article/10.3389/fninf.2016.00020/full

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gdevenyi commented 8 years ago

Most definitely agree, every time I see a new MATLAB toolbox I'm shocked and dismayed.

cfhammill commented 7 years ago

Main thing voxelstats has that we don't is volumetric predictors. Kiran for example has expressed an interest in this feature, in his use case there are voxel-wise dosimetry data for each group that he'd like to covary for. I think the feature is generally useful.