Error running test: The 'pydpiper==2.0.13' distribution was not found and is required by the application

[ghost]

Hey, just trying to run the test and I get this error. Is this a path issue?

"The 'pydpiper==2.0.13' distribution was not found and is required by the application"

(I've run setup.py install)

[gdevenyi]

As with other issues you have reported, please provide full details of exactly how you prepared the system beforehand as well as all of your input and all of your outputs.

If you examine the setup.py install, I suspect you didn't install successfully.

[ghost]

Thank you Gabriel I will do that.

[ghost]

Ok.

Pydpiper was downloaded with

git clone https://github.com/Mouse-Imaging-Centre/pydpiper.git

I am attempting to install and run it in a container based on

nistmni/minc-toolkit:1.9.16

I successfully install minc-stuffs.

Attached (file) is the output of

python3 setup.py install

And

pydpiper_testing/test_MBM_and_MAGeT.py test-data/

fails with

pkg_resources.DistributionNotFound: The 'pydpiper==2.0.13' distribution was not found and is required by the application

pydpiper_setup_log.txt

The only potential problem I could imagine is that setup.py is being run with python 3.5.2 rather than 3.6 (thus the f-string errors) - I'm running it like that because of an issue getting python-dev working with both 3.5.2 and 3.6 at the same time. However it does look like the install is succeeding.

[gdevenyi]

That error is pretty clear, the egg files for pydpiper didn't get installed because of the syntax error, as such the pydpiper scripts installed in bin can't launch the egg libraries. You'll need 3.6 to support f-strings.

[gdevenyi]

This is a bug since the fstring was introduced but setup.y currently only requires 3.5.

Either we'll fix the fstring or upgrade the requirements.

[ghost]

Thank you.