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Mouse-Imaging-Centre / pydpiper

Python code for flexible pipeline control
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Feature Request: Optionally do a montage of all input mincs #445

Open nzxwang opened 4 years ago

nzxwang commented 4 years ago

This was suggested by Nili. She had a pipeline of 800 brains pooled from different sources. Although it's the responsibility of the distortion correcter to check the integrity of the distortion corrected image, it would be hard to trust all people who corrected the 800 brains

bcdarwin commented 4 years ago

Our ex-vivo scans typically have a fairly large FOV and brains rotated fairly arbitrarily so this wouldn't look very good. Might be easonable for in-vivo images though ...