search

MouseLand / cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
https://www.cellpose.org/
BSD 3-Clause "New" or "Revised" License
1.33k stars 382 forks source link

pyqtgraph added into environment.yml #896

Closed onurserce closed 5 months ago

onurserce commented 6 months ago

CellPose requires pyqtgraph when cloned from the GitHub repository and installed via pip install -e . command, otherwise it gives the following error:

(DVP) ➜  DeepVisualProteomics git:(development) ✗ python -m cellpose
GUI ERROR: No module named 'pyqtgraph'
GUI FAILED: GUI dependencies may not be installed, to install, run
     pip install 'cellpose[gui]'

pip install pyqtgraph solves the problem.