MouseLand / cellpose

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
https://www.cellpose.org/
BSD 3-Clause "New" or "Revised" License
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cell membrane protein segmentation #960

Open arindampal10629 opened 1 week ago

arindampal10629 commented 1 week ago

Hello, I have been using cellpose 3 for live-cell imaging segmentation and that works great. however, I am interested in segmenting immunostained membrane/ junctional proteins. Is there a different method for training with our own data set in this case? whenever i tried selecting regions of interest, conducted training, and then running the model, i get no ROIs as an output. i may be doing something wrong? some help would be very beneficial.

Thank you!